Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation

Author:

Kuang Muyu1,Zhou Zhenhua2,Lu Zhongyuan3,Shen Weina1,Ge Haiyan4,Tao Xiaoting5,Zhao Yue5,Zhuge Lingdun5,Sun Yihua5,Ji Dongmei6,Zhang Huibiao7ORCID

Affiliation:

1. Phase I Clinical Trial Center Fudan University Shanghai Cancer Center Shanghai China

2. Department of Orthopaedic Oncology, Changzheng Hospital Naval Military Medical University Shanghai China

3. Department of Thoracic Surgery 903th Hospital of PLA Hangzhou China

4. Department of Pulmonary Diseases Huadong Hospital Shanghai China

5. Department of Thoracic Surgery Fudan University Shanghai Cancer Center Shanghai China

6. Department of Head & Neck tumors and Neuroendocrine tumors Fudan University Shanghai Cancer Center Shanghai China

7. Department of Thoracic Surgery Huadong Hospital Shanghai China

Abstract

AbstractBackground and objectiveThe development of epigenetics holds great promise for diagnosis and treatment of lung adenocarcinoma (LUAD). The purpose of this work was to analyze the correlation between Ras Homolog Gene Family Member H (RHOH) expression and methylation in patients with LUAD and its association with survival.MethodsData related to gene expression, DNA methylation, and clinical features of LUAD from The Cancer Genome Atlas (TCGA) database were analyzed. A total of 50 patients were included in verification group. The methylation level of RHOH in verification group was detected by bisulfite amplicon sequencing.ResultsThe RHOH methylation level in TCGA cohort was significantly and negatively correlated with its expression level (Cor = −0.5, p = 2.687e−33). Patients with hypermethylation and low expression of RHOH had significantly worse prognosis than patients with hypomethylation and low expression of RHOH (TCGA: p = 0.004; validation cohort: p = 0.006, HR: 4.740, 95% CI: 1.567–14.340).ConclusionOur research revealed that RHOH may prove to be a new potential prognostic predictor for LUAD patients.

Publisher

Wiley

Subject

Genetics (clinical),Pulmonary and Respiratory Medicine,Immunology and Allergy

Reference32 articles.

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