Machine learning improves the prediction of significant fibrosis in Asian patients with metabolic dysfunction‐associated steatotic liver disease The Gut and Obesity in Asia (GO‐ASIA) Study

Author:

Verma Nipun1ORCID,Duseja Ajay1ORCID,Mehta Manu1,De Arka1ORCID,Lin Huapeng2,Wong Vincent Wai‐Sun2ORCID,Wong Grace Lai‐Hung2,Rajaram Ruveena Bhavani3,Chan Wah‐Kheong3,Mahadeva Sanjiv3ORCID,Zheng Ming‐Hua4ORCID,Liu Wen‐Yue5,Treeprasertsuk Sombat6,Prasoppokakorn Thaninee6,Kakizaki Satoru7,Seki Yosuke8,Kasama Kazunori8,Charatcharoenwitthaya Phunchai9ORCID,Sathirawich Phalath9,Kulkarni Anand10ORCID,Purnomo Hery Djagat11,Kamani Lubna12,Lee Yeong Yeh13ORCID,Wong Mung Seong13,Tan Eunice X. X.14,Young Dan Yock14

Affiliation:

1. Department of Hepatology Postgraduate Institute of Medical Education and Research Chandigarh India

2. Department of Medicine and Therapeutics The Chinese University of Hong Kong Hong Kong China

3. Gastroenterology and Hepatology Unit, Department of Medicine, Faculty of Medicine University of Malaya Medical Centre Kuala Lumpur Malaysia

4. NAFLD Research Centre Department of Hepatology The First Affiliated Hospital of Wenzhou Medical University Wenzhou China

5. Department of Endocrinology The First Affiliated Hospital of Wenzhou Medical University Wenzhou China

6. Division of Gastroenterology King Chulalongkorn Memorial Hospital, Chulalongkorn University Bangkok Thailand

7. Department of Clinical Research National Hospital Organization Takasaki General Medical Centre Takasaki Japan

8. Weight Loss and Metabolic Surgery Centre Yotsuya Medical Cube Tokyo Japan

9. Division of Gastroenterology Faculty of Medicine Siriraj Hospital, Mahidol University Bangkok Thailand

10. Asian Institute of Gastroenterology Hospital Hyderabad India

11. Faculty of Medicine Diponegoro University, Kariadi Hospital Semarang Indonesia

12. National Medical Centre Karachi Pakistan

13. School of Medical Sciences Universiti Sains Malaysia Kota Bharu Malaysia

14. Department of Medicine National University Singapore Singapore Singapore

Abstract

SummaryBackgroundThe precise estimation of cases with significant fibrosis (SF) is an unmet goal in non‐alcoholic fatty liver disease (NAFLD/MASLD).AimsWe evaluated the performance of machine learning (ML) and non‐patented scores for ruling out SF among NAFLD/MASLD patients.MethodsTwenty‐one ML models were trained (N = 1153), tested (N = 283), and validated (N = 220) on clinical and biochemical parameters of histologically‐proven NAFLD/MASLD patients (N = 1656) collected across 14 centres in 8 Asian countries. Their performance for detecting histological‐SF (≥F2fibrosis) were evaluated with APRI, FIB4, NFS, BARD, and SAFE (NPV/F1‐score as model‐selection criteria).ResultsPatients aged 47 years (median), 54.6% males, 73.7% with metabolic syndrome, and 32.9% with histological‐SF were included in the study. Patients with SFvs.no‐SF had higher age, aminotransferases, fasting plasma glucose, metabolic syndrome, uncontrolled diabetes, and NAFLD activity score (p < 0.001, each). ML models showed 7%–12% better discrimination than FIB‐4 to detect SF. Optimised random forest (RF) yielded best NPV/F1 in overall set (0.947/0.754), test set (0.798/0.588) and validation set (0.852/0.559), as compared to FIB4 in overall set (0.744/0.499), test set (0.722/0.456), and validation set (0.806/0.507). Compared to FIB‐4, RF could pick 10 times more patients with SF, reduce unnecessary referrals by 28%, and prevent missed referrals by 78%. Age, AST, ALT fasting plasma glucose, and platelet count were top features determining the SF. Sequential use of SAFE < 140 and FIB4 < 1.2 (when SAFE > 140) was next best in ruling out SF (NPV of 0.757, 0.724 and 0.827 in overall, test and validation set).ConclusionsML with clinical, anthropometric data and simple blood investigations perform better than FIB‐4 for ruling out SF in biopsy‐proven Asian NAFLD/MASLD patients.

Publisher

Wiley

Subject

Pharmacology (medical),Gastroenterology,Hepatology

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