Prognostic, immunity, stemness, and anticancer drug sensitivity characterization of pyroptosis related genes in non‐small cell lung cancer

Author:

Xu Cong1,Ma Hongming2,Chen Jiawen3,Li Xincheng4,Wang Zhina2,Hu Bin4,Zhang Nan2,Meng Fanjie4ORCID

Affiliation:

1. Department of Thoracic Surgery Peking University Shougang Hospital Beijing China

2. Department of Respiratory and Critical Care Emergency General Hospital Beijing China

3. Beijing Institute of Lifeomics Beijing China

4. Department of Thoracic Surgery Beijing Institute of Respiratory Medicine and Beijing Chao‐Yang Hospital, Capital Medical University Beijing China

Abstract

AbstractBackgroundPyroptosis plays a pivotal role in the tumor immune microenvironment (TME) dynamics, particularly in non‐small cell lung cancer (NSCLC). The aim of our study was to explore its effects on tumor progression, TME patterns, and the efficacy of therapeutic interventions in NSCLC.MethodsOur investigation encompassed a thorough analysis of pyroptosis‐related genes (PRGs), integrating immunohistochemistry (IHC) data, TME characteristics, stemness indices, and anticancer drug sensitivities. We aimed to analyze mRNA expression profiles across various cancers, constructing benchmark datasets to assess the clinical significance of PRGs in NSCLC. This included evaluating their association with clinical responses and efficacy. Notably, both our and HPA IHC data demonstrated significantly elevated GSDMD‐N protein levels in lung squamous cell carcinoma (LUSC) tissues.ResultsThe expression of PRGs differed significantly between tumor and normal tissues across various cancers, as validated by IHC data, and was correlated with prognosis (p < 0.05). Moreover, our investigation revealed significant differences (p < 0.05) in the expression of the PRGs among distinct TME subtypes categorized as C1 (wound healing), C3 (inflammatory), C2 (IFN‐gamma dominant), C5 (immunological quiet), C4 (lymphocyte deficient), and C6 (TGF‐beta dominant). Additionally, our research on anticancer drug sensitivity uncovered compelling connections between specific anticancer medications and the expression of PRGs, including GSDMD, ELANE, IL18, and CHMP4A (p < 0.05).ConclusionOur study provided valuable insights into the critical role of PRGs in TME modulation, tumor stemness, and anticancer drug sensitivity across diverse cancers. Our findings illuminate the intricate relationship between pyroptosis and the TME, offering new perspectives for enhancing NSCLC treatment and prognosis.

Funder

Wu Jieping Medical Foundation

Beijing Postdoctoral Science Foundation

Publisher

Wiley

Subject

Pulmonary and Respiratory Medicine,Oncology,General Medicine

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