An artificial intelligence network‐guided signature for predicting outcome and immunotherapy response in lung adenocarcinoma patients based on 26 machine learning algorithms

Author:

Zhang Nan123,Zhang Hao4,Liu Zaoqu5,Dai Ziyu13,Wu Wantao136,Zhou Ran7,Li Shuyu8,Wang Zeyu13,Liang Xisong13,Wen Jie13,Zhang Xun13,Zhang Bo13,Ouyang Sirui13,Zhang Jian9,Luo Peng9ORCID,Li Xizhe31011,Cheng Quan13ORCID

Affiliation:

1. Department of Neurosurgery, Xiangya Hospital Central South University Changsha China

2. College of Life Science and Technology Huazhong University of Science and Technology Wuhan China

3. National Clinical Research Center for Geriatric Disorders, Xiangya Hospital Central South University Changsha China

4. Department of Neurosurgery, The Second Affiliated Hospital Chongqing Medical University Chongqing China

5. Department of Interventional Radiology The First Affiliated Hospital of Zhengzhou University Zhengzhou China

6. Department of Oncology, Xiangya Hospital Central South University Changsha China

7. Division of Neuroscience and Experimental Psychology, Faculty of Biology, Medicine and Health University of Manchester Manchester UK

8. Department of Thyroid and Breast Surgery, Tongji Hospital Tongji Medical College of Huazhong University of Science and Technology Wuhan China

9. Department of Oncology, Zhujiang Hospital Southern Medical University Guangzhou China

10. Department of Thoracic Surgery, Xiangya Hospital Central South University Changsha China

11. Hunan Engineering Research Center for Pulmonary Nodules Precise Diagnosis & Treatment Changsha China

Abstract

AbstractThe immune cells play an increasingly vital role in influencing the proliferation, progression, and metastasis of lung adenocarcinoma (LUAD) cells. However, the potential of immune cells' specific genes‐based model remains largely unknown. In the current study, by analysing single‐cell RNA sequencing (scRNA‐seq) data and bulk RNA sequencing data, the tumour‐infiltrating immune cell (TIIC) associated signature was developed based on a total of 26 machine learning (ML) algorithms. As a result, the TIIC signature score could predict survival outcomes of LUAD patients across five independent datasets. The TIIC signature score showed superior performance to 168 previously established signatures in LUAD. Moreover, the TIIC signature score developed by the immunofluorescence staining of the tissue array of LUAD patients showed a prognostic value. Our research revealed a solid connection between TIIC signature score and tumour immunity as well as metabolism. Additionally, it has been discovered that the TIIC signature score can forecast genomic change, chemotherapeutic drug susceptibility, and—most significantly—immunotherapeutic response. As a newly demonstrated biomarker, the TIIC signature score facilitated the selection of the LUAD population who would benefit from future clinical stratification.

Funder

National Natural Science Foundation of China

Publisher

Wiley

Subject

Cell Biology,General Medicine

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