The chromatin accessibility landscape of mouse oocytes during configuration transition

Author:

Zhu Shuai1,Li Jiashuo1,Wang Xiuwan1,Jin Yifei1,Wang Hengjie1,An Huiqing1,Sun Hongzheng1,Han Longsen1,Shen Bin1ORCID,Wang Qiang12

Affiliation:

1. State Key Laboratory of Reproductive Medicine and Offspring Health, Changzhou Maternity and Child Health Care Hospital, Changzhou Medical Center Nanjing Medical University Nanjing China

2. Center for Global Health, School of Public Health Nanjing Medical University Nanjing China

Abstract

AbstractThe transition of chromatin configuration in mammalian oocytes from a non‐surrounded nucleolus (NSN) to a surrounded nucleolus (SN) is critical for acquiring the developmental competence. However, the genomic and epigenomic features underlying this process remain poorly understood. In the present study, we first establish the chromatin accessibility landscape of mouse oocytes from NSN to SN stage. Through the integrative analysis of multi‐omics, we find that the establishment of DNA methylation in oocytes is independent of the dynamics of chromatin accessibility. In contrast, histone H3K4me3 status is closely associated with the dynamics of accessible regions during configuration transition. Furthermore, by focusing on the actively transcribed genes in NSN and SN oocytes, we discover that chromatin accessibility coupled with histone methylation (H3K4me3 and H3K27me3) participates in the transcriptional control during phase transition. In sum, our data provide a comprehensive resource for probing configuration transition in oocytes, and offer insights into the mechanisms determining chromatin dynamics and oocyte quality.

Funder

National Natural Science Foundation of China

National Key Research and Development Program of China

Natural Science Foundation of Jiangsu Province

Publisher

Wiley

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