Deep learning integrates histopathology and proteogenomics at a pan-cancer level

Author:

Wang Joshua M.,Hong Runyu,Demicco Elizabeth G.,Tan Jimin,Lazcano Rossana,Moreira Andre L.,Li Yize,Calinawan Anna,Razavian Narges,Schraink Tobias,Gillette Michael A.,Omenn Gilbert S.,An Eunkyung,Rodriguez Henry,Tsirigos Aristotelis,Ruggles Kelly V.,Ding Li,Robles Ana I.,Mani D.R.,Rodland Karin D.,Lazar Alexander J.,Liu Wenke,Fenyö DavidORCID,Aguet François,Akiyama Yo,Anand Shankara,Anurag Meenakshi,Babur Özgün,Bavarva Jasmin,Birger Chet,Birrer Michael J.,Cantley Lewis C.,Cao Song,Carr Steven A.,Ceccarelli Michele,Chan Daniel W.,Chinnaiyan Arul M.,Cho Hanbyul,Chowdhury Shrabanti,Cieslik Marcin P.,Clauser Karl R.,Colaprico Antonio,Zhou Daniel Cui,da Veiga Leprevost Felipe,Day Corbin,Dhanasekaran Saravana M.,Domagalski Marcin J.,Dou Yongchao,Druker Brian J.,Edwards Nathan,Ellis Matthew J.,Selvan Myvizhi Esai,Foltz Steven M.,Francis Alicia,Geffen Yifat,Getz Gad,Gonzalez Robles Tania J.,Gosline Sara J.C.,Gümüş Zeynep H.,Heiman David I.,Hiltke Tara,Hostetter Galen,Hu Yingwei,Huang Chen,Huntsman Emily,Iavarone Antonio,Jaehnig Eric J.,Jewell Scott D.,Ji Jiayi,Jiang Wen,Johnson Jared L.,Katsnelson Lizabeth,Ketchum Karen A.,Kolodziejczak Iga,Krug Karsten,Kumar-Sinha Chandan,Lei Jonathan T.,Liang Wen-Wei,Liao Yuxing,Lindgren Caleb M.,Liu Tao,Ma Weiping,Rodrigues Fernanda Martins,McKerrow Wilson,Mesri Mehdi,Nesvizhskii Alexey I.,Newton Chelsea J.,Oldroyd Robert,Paulovich Amanda G.,Payne Samuel H.,Petralia Francesca,Pugliese Pietro,Reva Boris,Rykunov Dmitry,Satpathy Shankha,Savage Sara R.,Schadt Eric E.,Schnaubelt Michael,Schürer Stephan,Shi Zhiao,Smith Richard D.,Song Xiaoyu,Song Yizhe,Stathias Vasileios,Storrs Erik P.,Terekhanova Nadezhda V.,Thangudu Ratna R.,Thiagarajan Mathangi,Tignor Nicole,Wang Liang-Bo,Wang Pei,Wang Ying,Wen Bo,Wiznerowicz Maciej,Wu Yige,Wyczalkowski Matthew A.,Yao Lijun,Yaron Tomer M.,Yi Xinpei,Zhang Bing,Zhang Hui,Zhang Qing,Zhang Xu,Zhang Zhen

Publisher

Elsevier BV

Subject

General Biochemistry, Genetics and Molecular Biology

Reference40 articles.

1. Digital pathology and artificial intelligence;Niazi;Lancet Oncol.,2019

2. Deep neural network models for computational histopathology: A survey;Srinidhi;Med. Image Anal.,2021

3. Classification and mutation prediction from non–small cell lung cancer histopathology images using deep learning;Coudray;Nat. Med.,2018

4. Predicting and Visualizing STK11 Mutation in Lung Adenocarcinoma Histopathology Slides Using Deep Learning;Hong;BioMedInformatics,2021

5. Predicting endometrial cancer subtypes and molecular features from histopathology images using multi-resolution deep learning models;Hong;Cell Rep. Med.,2021

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