Diversity, abundance, and expression of proteorhodopsin genes in the northern South China Sea-Reference-Cited by-同舟云学术

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Diversity, abundance, and expression of proteorhodopsin genes in the northern South China Sea

Published:2024-10 Issue: Volume:259 Page:119514
ISSN:0013-9351
Container-title:Environmental Research
language:en
Short-container-title:Environmental Research

Author:

Li Shanhui,Yin Lingzi,Duan Li,Li Jialing^ORCID,Wang Pandeng^ORCID,Gao Shaoming,Xian Wendong^ORCID,Li Wenjun^ORCID

Publisher

Elsevier BV

Reference86 articles.

1. KofamKOALA: KEGG Ortholog assignment based on profile HMM and adaptive score threshold;Aramaki;Bioinformatics,2019

2. Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems;Atamna-Ismaeel;ISME J.,2008

3. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing;Bankevich;J. Comput. Biol.,2012

4. Rhodopsin-mediated nutrient uptake by cultivated photoheterotrophic Verrucomicrobiota;Bar-Shalom;ISME J.,2023

5. Bacterial rhodopsin: evidence for a new type of phototrophy in the sea;Béjà;Science,2000

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