STGNNks: Identifying cell types in spatial transcriptomics data based on graph neural network, denoising auto-encoder, and k-sums clustering

Author:

Peng LihongORCID,He Xianzhi,Peng Xinhuai,Li Zejun,Zhang Li

Publisher

Elsevier BV

Subject

Health Informatics,Computer Science Applications

Reference71 articles.

1. Graph embedding and Gaussian mixture variational autoencoder network for end-to-end analysis of single-cell RNA sequencing data;Xu;Cell Rep. Methods,2023

2. Gene function and cell surface protein association analysis based on single-cell multiomics data;Hu;Comput. Biol. Med.,2023

3. Modeling and analyzing single-cell multimodal data with deep parametric inference;Hu;Brief. Bioinform.,2023

4. Statistical and machine learning methods for spatially resolved transcriptomics with histology;Hu;Comput. Struct. Biotechnol. J.,2021

5. CLNN-loop: a deep learning model to predict CTCF-mediated chromatin loops in the different cell lines and CTCF-binding sites (CBS) pair types;Zhang;Bioinformatics,2022

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3