Halalkalicoccus tibetensis gen. nov., sp. nov., representing a novel genus of haloalkaliphilic archaea

Author:

Xue Yanfen1,Fan Huapeng1,Ventosa Antonio2,Grant William D.3,Jones Brian E.4,Cowan Don A.5,Ma Yanhe1

Affiliation:

1. State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100080, China

2. Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, 41012 Seville, Spain

3. Department of Infection, Immunity and Inflammation, University of Leicester, Leicester LE1 9HN, UK

4. Genencor International BV, Archimedesweg 30, 2333 CN Leiden, The Netherlands

5. Department of Biotechnology, University of the Western Cape, Bellville, 7535, South Africa

Abstract

A haloalkaliphilic archaeon (strain DS12T) isolated from Lake Zabuye, the Tibetan Plateau, China, was characterized to elucidate its taxonomy. The strain was aerobic, chemo-organotrophic, and grew optimally at 40 °C, pH 9·5–10·0 and 3·4 M NaCl. Cells of strain DS12T were non-motile cocci and stained Gram-variable. The major polar lipids of strain DS12T were diphytanyl and phytanyl-sesterterpanyl diether derivatives of phosphatidylglycerol and phosphatidylglycerol phosphate methyl ester. No glycolipids were detected. Phylogenetic analysis revealed that the strain formed a distinct lineage within the family Halobacteriaceae. The low 16S rRNA gene sequence similarity values to its closest relatives (91·5–92·5 %) and its signature bases both suggest that the strain has no close affinity with any members of the family Halobacteriaceae with validly published names. Therefore, it is proposed that strain DS12T (=AS 1.3240T=JCM 11890T) represents the type strain of a novel species in a new genus, Halalkalicoccus tibetensis gen. nov., sp. nov.

Publisher

Microbiology Society

Subject

General Medicine,Ecology, Evolution, Behavior and Systematics,Microbiology

Reference20 articles.

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3. Characterization of a novel halophilic archaeon, Halobiforma haloterrestris gen. nov., sp. nov. and transfer of Natronobacterium nitratireducens to Halobiforma nitratireducens comb. nov;Hezayen;Int J Syst Evol Microbiol,2002

4. Taxonomy of the family Halobacteriaceae and the description of two new genera Halorubrobacterium and Natrialba;Kamekura;J Gen Appl Microbiol,1995

5. Diversity of alkaliphilic halobacteria: proposals for transfer of Natronobacterium vacuolatum , Natronobacterium magadii , and Natronobacterium pharaonis toHalorubrum , Natrialba , and Natronomonas gen. nov.,respectively, as Halorubrum vacuolatum comb. nov., Natrialba magadii comb. nov., and Natronomonas pharaonis comb. nov., respectively;Kamekura;Int J Syst Bacteriol,1997

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