Comparison of genomic diversity between single and pooled Staphylococcus aureus colonies isolated from human colonization cultures-Reference-Cited by-同舟云学术

Comparison of genomic diversity between single and pooled Staphylococcus aureus colonies isolated from human colonization cultures

Published:2023-11-07 Issue:11 Volume:9 Page:
ISSN:2057-5858
Container-title:Microbial Genomics
language:en
Short-container-title:

Author:

Raghuram Vishnu¹^ORCID,Gunoskey Jessica J.²^ORCID,Hofstetter Katrina S.³^ORCID,Jacko Natasia F.²^ORCID,Shumaker Margot J.²^ORCID,Hu Yi-Juan⁴^ORCID,Read Timothy D.³^ORCID,David Michael Z.²^ORCID

Affiliation:

1. Microbiology and Molecular Genetics Program, Graduate Division of Biological and Biomedical Sciences, Laney Graduate School, Emory University, Atlanta, Georgia, USA

2. Division of Infectious Diseases, Department of Medicine, University of Pennsylvania, Philadelphia, USA

3. Division of Infectious Diseases, Department of Medicine, Emory University, Atlanta, Georgia, USA

4. Department of Biostatistics and Bioinformatics, Emory University, Atlanta, Georgia, USA

Abstract

Graphical abstract

Funder

Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases

National Institutes of Health

Publisher

Microbiology Society

Subject

General Medicine

Link

https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.001111?crawler=true&mimetype=application/pdf

Reference63 articles.

1. Code for analysis available in github: github.com/VishnuRaghuram94/GASP. figshare. Dataset. Raw data for the Genomic Analysis of Singles and Pools (GASP) project;Raghuram,2023

2. Niche-specific genome degradation and convergent evolution shaping Staphylococcus aureus adaptation during severe infections

3. Unsuspected Clonal Spread of Methicillin-Resistant Staphylococcus aureus Causing Bloodstream Infections in Hospitalized Adults Detected Using Whole Genome Sequencing

4. Pathogen Genomics in Public Health

5. Within-host microevolution of Streptococcus pneumoniae is rapid and adaptive during natural colonisation

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