Integrated molecular analysis of tumor biopsies on sequential CTLA-4 and PD-1 blockade reveals markers of response and resistance

Author:

Roh Whijae12ORCID,Chen Pei-Ling13ORCID,Reuben Alexandre4ORCID,Spencer Christine N.1ORCID,Prieto Peter A.4,Miller John P.5ORCID,Gopalakrishnan Vancheswaran4ORCID,Wang Feng1,Cooper Zachary A.14ORCID,Reddy Sangeetha M.6,Gumbs Curtis1ORCID,Little Latasha1ORCID,Chang Qing1,Chen Wei-Shen13ORCID,Wani Khalida7,De Macedo Mariana Petaccia78,Chen Eveline7ORCID,Austin-Breneman Jacob L.4ORCID,Jiang Hong4,Roszik Jason19ORCID,Tetzlaff Michael T.3ORCID,Davies Michael A.9,Gershenwald Jeffrey E.4ORCID,Tawbi Hussein9ORCID,Lazar Alexander J.47ORCID,Hwu Patrick9ORCID,Hwu Wen-Jen9ORCID,Diab Adi9ORCID,Glitza Isabella C.9ORCID,Patel Sapna P.9,Woodman Scott E.9,Amaria Rodabe N.9,Prieto Victor G.3ORCID,Hu Jianhua10,Sharma Padmanee1112,Allison James P.11,Chin Lynda13,Zhang Jianhua14,Wargo Jennifer A.14ORCID,Futreal P. Andrew1ORCID

Affiliation:

1. Department of Genomic Medicine, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

2. Cancer Biology Graduate Program, The University of Texas MD Anderson Cancer Center UTHealth Graduate School of Biomedical Sciences at Houston, Houston, TX 77030, USA.

3. Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

4. Department of Surgical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

5. Oncology Research for Biologics and Immunotherapy Translation, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

6. Division of Cancer Medicine, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

7. Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

8. Pathology Department, A.C.Camargo Cancer Center, São Paulo, SP-01509-010, Brazil.

9. Department of Melanoma Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

10. Department of Biostatistics, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

11. Department of Immunology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

12. Department of Genitourinary Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

13. University of Texas System, Austin, TX 78701, USA.

14. Applied Cancer Science Institute, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

Abstract

Profiling of melanoma patients treated with checkpoint blockade reveals TCR clonality and copy number loss as correlates of therapeutic response.

Funder

National Institutes of Health

National Cancer Institute

Welch Foundation

Cancer Prevention and Research Institute of Texas

Melanoma Research Alliance

Dr. Miriam and Sheldon G. Adelson Medical Research Foundation

Publisher

American Association for the Advancement of Science (AAAS)

Subject

General Medicine

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