A subcellular map of the human proteome

Author:

Thul Peter J.1ORCID,Åkesson Lovisa1ORCID,Wiking Mikaela1ORCID,Mahdessian Diana1ORCID,Geladaki Aikaterini23ORCID,Ait Blal Hammou1,Alm Tove1ORCID,Asplund Anna4,Björk Lars1ORCID,Breckels Lisa M.25ORCID,Bäckström Anna1,Danielsson Frida1,Fagerberg Linn1ORCID,Fall Jenny1,Gatto Laurent25ORCID,Gnann Christian1,Hober Sophia6,Hjelmare Martin1ORCID,Johansson Fredric1ORCID,Lee Sunjae1ORCID,Lindskog Cecilia4,Mulder Jan7ORCID,Mulvey Claire M.2ORCID,Nilsson Peter1ORCID,Oksvold Per1ORCID,Rockberg Johan6ORCID,Schutten Rutger1ORCID,Schwenk Jochen M.1ORCID,Sivertsson Åsa1ORCID,Sjöstedt Evelina4ORCID,Skogs Marie1,Stadler Charlotte1ORCID,Sullivan Devin P.1ORCID,Tegel Hanna6ORCID,Winsnes Casper1ORCID,Zhang Cheng1ORCID,Zwahlen Martin1ORCID,Mardinoglu Adil1ORCID,Pontén Fredrik4ORCID,von Feilitzen Kalle1,Lilley Kathryn S.2,Uhlén Mathias1ORCID,Lundberg Emma1ORCID

Affiliation:

1. Science for Life Laboratory, School of Biotechnology, KTH Royal Institute of Technology, SE-171 21 Stockholm, Sweden.

2. Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge CB2 1QR, UK.

3. Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK.

4. Department of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, SE-751 85 Uppsala, Sweden.

5. Computational Proteomics Unit, Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge CB2 1QR, UK.

6. Department of Proteomics, School of Biotechnology, KTH Royal Institute of Technology, SE-106 91 Stockholm, Sweden.

7. Science for Life Laboratory, Department of Neuroscience, Karolinska Institute, SE-171 77 Stockholm, Sweden.

Abstract

Mapping the proteome Proteins function in the context of their environment, so an understanding of cellular processes requires a knowledge of protein localization. Thul et al. used immunofluorescence microscopy to map 12,003 human proteins at a single-cell level into 30 cellular compartments and substructures (see the Perspective by Horwitz and Johnson). They validated their results by mass spectroscopy and used them to model and refine protein-protein interaction networks. The cellular proteome is highly spatiotemporally regulated. Many proteins localize to multiple compartments, and many show cell-to-cell variation in their expression patterns. Presented as an interactive database called the Cell Atlas, this work provides an important resource for ongoing efforts to understand human biology. Science , this issue p. eaal3321 ; see also p. 806

Funder

Familjen Erling-Perssons Stiftelse

Knut och Alice Wallenbergs Stiftelse

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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