The Genome of the Diatom Thalassiosira Pseudonana : Ecology, Evolution, and Metabolism-Reference-Cited by-同舟云学术

The Genome of the Diatom Thalassiosira Pseudonana : Ecology, Evolution, and Metabolism

Published:2004-10 Issue:5693 Volume:306 Page:79-86
ISSN:0036-8075
Container-title:Science
language:en
Short-container-title:Science

Author:

Armbrust E. Virginia¹²³⁴⁵,Berges John A.¹²³⁴⁵,Bowler Chris¹²³⁴⁵,Green Beverley R.¹²³⁴⁵,Martinez Diego¹²³⁴⁵,Putnam Nicholas H.¹²³⁴⁵,Zhou Shiguo¹²³⁴⁵,Allen Andrew E.¹²³⁴⁵,Apt Kirk E.¹²³⁴⁵,Bechner Michael¹²³⁴⁵,Brzezinski Mark A.¹²³⁴⁵,Chaal Balbir K.¹²³⁴⁵,Chiovitti Anthony¹²³⁴⁵,Davis Aubrey K.¹²³⁴⁵,Demarest Mark S.¹²³⁴⁵,Detter J. Chris¹²³⁴⁵,Glavina Tijana¹²³⁴⁵,Goodstein David¹²³⁴⁵,Hadi Masood Z.¹²³⁴⁵,Hellsten Uffe¹²³⁴⁵,Hildebrand Mark¹²³⁴⁵,Jenkins Bethany D.¹²³⁴⁵,Jurka Jerzy¹²³⁴⁵,Kapitonov Vladimir V.¹²³⁴⁵,Kröger Nils¹²³⁴⁵,Lau Winnie W. Y.¹²³⁴⁵,Lane Todd W.¹²³⁴⁵,Larimer Frank W.¹²³⁴⁵,Lippmeier J. Casey¹²³⁴⁵,Lucas Susan¹²³⁴⁵,Medina Mónica¹²³⁴⁵,Montsant Anton¹²³⁴⁵,Obornik Miroslav¹²³⁴⁵,Parker Micaela Schnitzler¹²³⁴⁵,Palenik Brian¹²³⁴⁵,Pazour Gregory J.¹²³⁴⁵,Richardson Paul M.¹²³⁴⁵,Rynearson Tatiana A.¹²³⁴⁵,Saito Mak A.¹²³⁴⁵,Schwartz David C.¹²³⁴⁵,Thamatrakoln Kimberlee¹²³⁴⁵,Valentin Klaus¹²³⁴⁵,Vardi Assaf¹²³⁴⁵,Wilkerson Frances P.¹²³⁴⁵,Rokhsar Daniel S.¹²³⁴⁵

Affiliation:

1. School of Oceanography, University of Washington, Seattle, WA 98195, USA.

2. Department of Biological Sciences, University of Wisconsin–Milwaukee, Milwaukee, WI 53201, USA.

3. Laboratory of Molecular Plant Biology, Stazione Zoologica, Villa Comunale, I 80121 Naples, Italy. Organismes Photosynthétiques et Environnement, Département de Biologie, 75230 Paris, France.

4. Ecole Normale Supérieure, 75230 Paris, France.

5. Department of Botany, University of British Columbia, Vancouver, B.C., Canada, V6T 1Z4.

Abstract

Diatoms are unicellular algae with plastids acquired by secondary endosymbiosis. They are responsible for ∼20% of global carbon fixation. We report the 34 million–base pair draft nuclear genome of the marine diatom Thalassiosira pseudonana and its 129 thousand–base pair plastid and 44 thousand–base pair mitochondrial genomes. Sequence and optical restriction mapping revealed 24 diploid nuclear chromosomes. We identified novel genes for silicic acid transport and formation of silica-based cell walls, high-affinity iron uptake, biosynthetic enzymes for several types of polyunsaturated fatty acids, use of a range of nitrogenous compounds, and a complete urea cycle, all attributes that allow diatoms to prosper in aquatic environments.

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

Reference50 articles.

1. Production and dissolution of biogenic silica in the ocean: Revised global estimates, comparison with regional data and relationship to biogenic sedimentation

2. Primary Production of the Biosphere: Integrating Terrestrial and Oceanic Components

3. The species concept in diatoms

4. Geophys. Res. Lett. 2002 29

5. Beyond micromachining: the potential of diatoms

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