Natural hybridization reveals incompatible alleles that cause melanoma in swordtail fish

Author:

Powell Daniel L.123ORCID,García-Olazábal Mateo23,Keegan Mackenzie4ORCID,Reilly Patrick5ORCID,Du Kang6ORCID,Díaz-Loyo Alejandra P.7,Banerjee Shreya1ORCID,Blakkan Danielle1ORCID,Reich David89ORCID,Andolfatto Peter10ORCID,Rosenthal Gil G.23ORCID,Schartl Manfred2361112ORCID,Schumer Molly12ORCID

Affiliation:

1. Department of Biology, Stanford University and Howard Hughes Medical Institute, Stanford, CA, USA.

2. Centro de Investigaciones Científicas de las Huastecas “Aguazarca”, A.C., Calnali, Hidalgo, Mexico.

3. Department of Biology, Texas A&M University, College Station, TX, USA.

4. Department of Biology, Northeastern University, Boston, MA, USA.

5. Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.

6. Developmental Biochemistry, Biocenter, University of Würzburg, Würzburg, Bavaria, Germany.

7. Laboratorio de Ecología de la Conducta, Instituto de Fisiología, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico.

8. Department of Genetics, Harvard Medical School, Howard Hughes Medical Institute, and the Broad Institute of Harvard and MIT, Cambridge, MA, USA.

9. Department of Human Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.

10. Department of Biological Sciences, Columbia University, New York, NY, USA.

11. Hagler Institute for Advanced Study, Texas A&M University, College Station, TX, USA.

12. Xiphophorus Genetic Stock Center, Texas State University San Marcos, San Marcos, TX, USA.

Abstract

Mapping vertebrate incompatibility alleles Deleterious gene interactions may underlie the observed hybrid incompatibilities. However, few genes underlying hybrid incompatibilities have been identified, and most of these involve species that do not hybridize in natural conditions. Powell et al. used genome sequencing to map genes likely responsible for incompatibilities that reduce fitness in naturally occurring hybrid swordtail fish. These gene combinations result in malignant melanoma, which is found in naturally hybridizing populations but is not present in the parental populations (see the Perspective by Dagilis and Matute). Using genome and population resequencing, the authors performed a genome-wide association study to identify potentially causative mutations. Using an admixture mapping approach that assessed introgression between multiple swordtail fish species, the authors suggest that lineages carry different genes that interact with the same candidate gene, resulting in the observed melanomas and providing insight into convergent hybrid incompatibles that arise between species. Science , this issue p. 731 ; see also p. 710

Funder

National Science Foundation

National Institutes of Health

Howard Hughes Medical Institute

Publisher

American Association for the Advancement of Science (AAAS)

Subject

Multidisciplinary

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