LUNGBANK: A Novel Biorepository Strategy Tailored for Comprehensive Multi-Omics Analysis and P-Medicine Applications in Lung Cancer

Author:

Ceker Dilek1,Baysungur Volkan2,Evman Serdar3,Kolbas Ilker3,Gordebil Abdurrahim3,Nalbantoglu Sinem1,Tambag Yusuf4,Kacar Omer1,Midi Ahmet5,Aslanoglu Hatice3,Kara Nulufer3,Algan Nilgun3,Boyacıoglu Ayberk3,Karademir-Yilmaz Betul6,Sahin Ali6,Ulbegi-Polat Hivda1,Sehitogullari Abidin7,Cibikdiken Ali Osman8,Buyukyilmaz Mucahit9,Aydilek Ibrahim Berkan10,Enes Abdulkerim10,Kucuker Sevde1,Karakaya Fatih1,Boyaci Ihsan11,Gumus Mahmut12,Senol Onur13,Oztug Merve14,Saban Evren14,Soysal Omer15,Buyukpinarbasili Nur15,Turna Akif16,Gunluoglu Mehmet Zeki11,Cakir Asli11,Tekin Saban2,Tazebay Uygar17,Karadag Abdullah1ORCID

Affiliation:

1. TUBİTAK Marmara Research Centre: Tubitak Marmara Arastirma Merkezi

2. University of Health Sciences: Saglik Bilimleri Universitesi

3. Sureyyapasa Chest Diseases and Chest Surgery Training and Research Hospital: Saglik Bakanligi Istanbul Sureyyapasa Gogus Hastaliklari ve Gogus Cerrahisi EA Hastanesi

4. TÜBİTAK BİLGEM: TUBITAK Bilisim ve Bilgi Guvenligi Ileri Teknolojiler Arastirma Merkezi

5. BAU School of Medicine: Bahcesehir Universitesi Tip Fakultesi

6. Marmara University: Marmara Universitesi

7. Sakarya University: Sakarya Universitesi

8. KTO Karatay Universitesi

9. Yartu Information Technology Services

10. Harran University: Harran Universitesi

11. Istanbul Medipol University: Istanbul Medipol Universitesi

12. Istanbul Medeniyet University: Istanbul Medeniyet Universitesi

13. Ataturk University: Ataturk Universitesi

14. TUBITAK UME: Ulusal Metroloji Enstitusu

15. Bezmialem Vakif University: Bezmialem Vakif Universitesi

16. Istanbul Universitesi-Cerrahpasa Cerrahpasa Tip Fakultesi

17. Gebze Technical University: Gebze Teknik Universitesi

Abstract

Abstract Background: In support of Project LUNGMARK, LUNGBANK was established as a pioneering biorepository dedicated to lung cancer. Designed for streamlined biospecimen handling, it employs high-volume technologies to secure high-quality samples. Fortified with robust data management, LUNGBANK efficiently integrates diverse datasets. This strategic infrastructure positions LUNGBANK as more than a biospecimen repository; it operates as a sophisticated platform for advanced lung cancer research, amplifying the potential for meaningful discoveries. Methods: In support of Project LUNGMARK, the establishment of LUNGBANK, a pioneering biorepository system dedicated to lung cancer, was undertaken. LUNGBANK is intricately designed to streamline the collection, transfer, storage, and processing of biospecimens, employing high-volume technologies to ensure the acquisition of high-quality biological specimens. The system is fortified with robust data management protocols, facilitating efficient integration of diverse datasets. This strategic infrastructure ensures that LUNGBANK not only serves as a repository of biospecimens but also operates as a sophisticated platform for advanced lung cancer research, enhancing the potential for meaningful discoveries in the field. Results: LUNGBANK, serving as a groundbreaking biorepository system, plays a pivotal role in furnishing a rich collection of biospecimens essential for unraveling the molecules and mechanisms linked to lung cancer. Rigorous standard operating procedures guided the meticulous collection of biospecimens, subjecting them to stringent quality control measures before inclusion in the study. Moreover, LUNGBANK has proven valuable in the establishment of patient-derived systems. The incorporation of cutting-edge technologies guarantees the acquisition of top-tier data, thereby amplifying the likelihood of substantial breakthroughs in both contemporary translational research and traditional histological evaluations. Conclusion: The establishment of LUNGBANK marks a significant stride towards addressing the pressing need for effective diagnostic and therapeutic systems in lung cancer research. By facilitating the collection and analysis of high-quality biospecimens, LUNGBANK serves as a valuable resource for unraveling the molecular intricacies of lung cancer initiation and progression. This comprehensive system not only supports Project LUNGMARK but also contributes to the broader landscape of personalized medicine, tailoring interventions to the specific needs of lung cancer patients.

Publisher

Research Square Platform LLC

Reference48 articles.

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