CDK5RAP3, a UFL1 substrate adaptor, is critical for liver development

Author:

Yang Rui12ORCID,Wang Huanmin12ORCID,Kang Boxi3,Chen Bin12,Shi Yaoyao4,Yang Shuchun12,Sun Lihong5,Liu Yufang12ORCID,Xiao Weidi6ORCID,Zhang Tao6ORCID,Yang Juntao1,Zhang Ye17,Zhu Mingzhao4,Xu Ping6,Chang Yongsheng17,Jia Yuyan12,Huang Yue12ORCID

Affiliation:

1. State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005, China

2. Department of Medical Genetics, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005, China

3. School of Life Sciences, Peking University, Beijing 100871, China

4. Institute of Biophysics, Chinese Academy of Sciences, Beijing 100005, China

5. Center for Experimental Animal Research, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005, China

6. State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences Beijing, Beijing Institute of Lifeomics, Beijing 102206, China

7. Department of Biochemistry & Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005, China

Abstract

Protein modification by ubiquitin and ubiquitin-like proteins (UBLs) regulates numerous biological functions. The UFM1 system, a novel UBL conjugation system, is implicated in mouse development and hematopoiesis. However, its broad biological functions and working mechanisms remain largely elusive. CDK5RAP3, a possible ufmylation substrate, is essential for epiboly and gastrulation in zebrafish. Herein, we report a critical role of CDK5RAP3 in liver development and hepatic functions. Cdk5rap3 knockout mice displayed prenatal lethality with severe liver hypoplasia, as characterized by delayed proliferation and compromised differentiation. Hepatocyte-specific Cdk5rap3 knockout mice suffered post-weaning lethality, due to serious hypoglycemia and impaired lipid metabolism. Depletion of CDK5RAP3 triggered endoplasmic reticulum stress and activated unfolded protein responses in hepatocytes. We detected the in vivo interaction of CDK5RAP3 with UFL1, the defined E3 ligase in ufmylation. Notably, loss of CDK5RAP3 altered the ufmylation profile in liver cells, suggesting that CDK5RAP3 serves as a novel substrate adaptor for this UBL modification. Collectively, our study identifies CDK5RAP3 as an important regulator of ufmylation and suggests the involvement of ufmylation in mammalian development.

Funder

National Natural Science Foundation of China

Chinese Academy of Medical Sciences

Publisher

The Company of Biologists

Subject

Developmental Biology,Molecular Biology

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