Using slisemap to interpret physical data

Author:

Seppäläinen LauriORCID,Björklund AntonORCID,Besel VitusORCID,Puolamäki KaiORCID

Abstract

Manifold visualisation techniques are commonly used to visualise high-dimensional datasets in physical sciences. In this paper, we apply a recently introduced manifold visualisation method, slisemap, on datasets from physics and chemistry. slisemap combines manifold visualisation with explainable artificial intelligence. Explainable artificial intelligence investigates the decision processes of black box machine learning models and complex simulators. With slisemap, we find an embedding such that data items with similar local explanations are grouped together. Hence, slisemap gives us an overview of the different behaviours of a black box model, where the patterns in the embedding reflect a target property. In this paper, we show how slisemap can be used and evaluated on physical data and that it is helpful in finding meaningful information on classification and regression models trained on these datasets.

Funder

Research Council of Finland

Helsinki University Library

Finnish Computing Competence Infrastructure

Doctoral Programme of University of Helsinki

Publisher

Public Library of Science (PLoS)

Subject

Multidisciplinary

Reference46 articles.

1. The Art of Using T-SNE for Single-Cell Transcriptomics;D Kobak;Nature Communications,2019

2. A Review of UMAP in Population Genetics;A Diaz-Papkovich;Journal of Human Genetics,2021

3. Exploring Chemical Reaction Space with Reaction Difference Fingerprints and Parametric T-SNE;M Andronov;ACS Omega,2021

4. Dissecting Stellar Chemical Abundance Space with T-SNE;F Anders;Astronomy & Astrophysics,2018

5. Machine Learning and the Physical Sciences;G Carleo;Reviews of Modern Physics,2019

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3