Compression of FASTQ and SAM Format Sequencing Data-Reference-Cited by-同舟云学术

Compression of FASTQ and SAM Format Sequencing Data

Published:2013-03-22 Issue:3 Volume:8 Page:e59190
ISSN:1932-6203
Container-title:PLoS ONE
language:en
Short-container-title:PLoS ONE

Author:

Bonfield James K.,Mahoney Matthew V.

Publisher

Public Library of Science (PLoS)

Subject

Multidisciplinary

Reference33 articles.

1. The future of dna sequence archiving;G Cochrane;GigaScience,2012

2. The sanger FASTQ format for sequences with quality scores, and the Solexa/fillumina FASTQ variants;PJA Cock;Nucleic Acids Research,2010

3. Genome sequencing in microfabricated high-density picolitre reactors;M Margulies;Nature,2005

4. Pandey V, Nutter RC, Prediger E (2008) Next-Generation Genome Sequencing, Berlin, Germany: Wiley- VCH, chapter Applied Biosystems SOLiD System: Ligation-Based Sequencing. 29–41.

5. Accurate whole human genome sequencing using reversible terminator chemistry;DR Bentley;Nature,2008

Cited by 149 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. A new efficient referential genome compression technique for FastQ files;Functional & Integrative Genomics;2023-11-11

2. A Pipeline for Constructing Reference Genomes for Large Cohort-Specific Metagenome Compression;Microorganisms;2023-10-14

3. Lossless compression for quality scores of genomic data based on high-throughput sequencing;Sixth International Conference on Computer Information Science and Application Technology (CISAT 2023);2023-10-11

4. Efficient sequencing data compression and FPGA acceleration based on a two-step framework;Frontiers in Genetics;2023-09-21

5. A pipeline for constructing reference genomes for large cohort-specific metagenome compression;2023-09-12