Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022

Author:

König Matthias1ORCID,Gleeson Padraig2ORCID,Golebiewski Martin3ORCID,Gorochowski Thomas E.4ORCID,Hucka Michael5ORCID,Keating Sarah M.2ORCID,Myers Chris J.6,Nickerson David P.7ORCID,Sommer Björn8,Waltemath Dagmar9ORCID,Schreiber Falk1011

Affiliation:

1. Institute for Biology, Institute for Theoretical Biology , Humboldt-University Berlin , Berlin , Germany

2. University College London , London , UK

3. Heidelberg Institute for Theoretical Studies (HITS) , Heidelberg , Germany

4. School of Biological Sciences , University of Bristol , Bristol , UK

5. California Institute of Technology , Pasadena , USA

6. Department of Electrical, Computer, and Energy Engineering , University of Colorado Boulder , Boulder , USA

7. Auckland Bioengineering Institute, University of Auckland , Auckland , New Zealand

8. Royal College of Arts , London , UK

9. Medical Informatics Laboratory, University Medicine Greifswald , Greifswald , Germany

10. Department of Computer and Information Science , University of Konstanz , Konstanz , Germany

11. Faculty of Information Technology , Monash University , Clayton , Australia

Abstract

Abstract This special issue of the Journal of Integrative Bioinformatics contains updated specifications of COMBINE standards in systems and synthetic biology. The 2022 special issue presents three updates to the standards: CellML 2.0.1, SBML Level 3 Package: Spatial Processes, Version 1, Release 1, and Synthetic Biology Open Language (SBOL) Version 3.1.0. This document can also be used to identify the latest specifications for all COMBINE standards. In addition, this editorial provides a brief overview of the COMBINE 2022 meeting in Berlin.

Publisher

Walter de Gruyter GmbH

Subject

General Medicine

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