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Next-generation sequencing technology as a powerful detection and semi-quantitative method for herpes simplex virus type 1 in pediatric encephalitis

  • Published:2019-10-25 Issue:2 Volume:26 Page:273-276
  • ISSN:1355-0284
  • Container-title:Journal of NeuroVirology
  • language:en
  • Short-container-title:J. Neurovirol.

Author:

Liu Lin-lin,Guo Ling-yun,Dong Jie,Huang Wen-hua,Zhao Li,Liu Bing,Zhang Xi-xi,Jiang Yong-qiang,Liu GangORCID

Funder

The Special Fund of The Pediatric Medical Coordinated Development Center of Beijing Hospitals Authority

National Science and Technology Major Project of China

Beijing Hospital Authority Dengfeng Talent Training Plan

Publisher

Springer Science and Business Media LLC

Subject

Virology,Cellular and Molecular Neuroscience,Neurology (clinical),Neurology

Reference13 articles.

1. Ai JW, Zhang HC, Cui P, Xu B, Gao Y, Cheng Q, Li T, Wu H, Zhang WH (2018) Dynamic and direct pathogen load surveillance to monitor disease progression and therapeutic efficacy in central nervous system infection using a novel semi-quantitive sequencing platform. J Inf Secur 76(3):307–310. https://doi.org/10.1016/j.jinf.2017.11.002

2. Brown JR, Bharucha T, Breuer J (2018) Encephalitis diagnosis using metagenomics: application of next generation sequencing for undiagnosed cases. J Inf Secur 76(3):225–240. https://doi.org/10.1016/j.jinf.2017.12.014

3. De Tiège X, Rozenberg F, Des Portes V, Lobut JB, Lebon P, Ponsot G, Héron B (2003) Herpes simplex encephalitis relapses in children: differentiation of two neurologic entities. Neurology 61(2):241–243

4. Fujii H, Kakiuchi S, Tsuji M, Nishimura H, Yoshikawa T, Yamada S, Omura N, Inagaki T, Shibamura M, Harada S, Taniguchi S, Saijo M (2018) Application of next-generation sequencing to detect acyclovir-resistant herpes simplex virus type 1 variants at low frequency in thymidine kinase gene of the isolates recovered from patients with hematopoietic stem cell transplantation. J Virol Methods 251:123–128. https://doi.org/10.1016/j.jviromet.2017.10.019

5. Granerod J, Ambrose HE, Davies NW, Clewley JP, Walsh AL, Morgan D, Cunningham R, Zuckerman M, Mutton KJ, Solomon T, Ward KN, Lunn MP, Irani SR, Vincent A, Brown DW, Crowcroft NS, UK Health Protection Agency (HPA) Aetiology of Encephalitis Study Group (2010) Causes of encephalitis and differences in their clinical presentations in England: a multicentre, population based prospective study. Lancet Infect Dis 10:835–844. https://doi.org/10.1016/S1473-3099(10)70222-X
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