Genome-wide analysis of deletions in maize population reveals abundant genetic diversity and functional impact-Reference-Cited by-同舟云学术

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Genome-wide analysis of deletions in maize population reveals abundant genetic diversity and functional impact

Published:2021-10-18 Issue:1 Volume:135 Page:273-290
ISSN:0040-5752
Container-title:Theoretical and Applied Genetics
language:en
Short-container-title:Theor Appl Genet

Author:

Zhang Xiao^ORCID,Zhu Yonghui,Kremling Karl A. G.,Romay M. Cinta,Bukowski Robert,Sun Qi,Gao Shibin,Buckler Edward S.,Lu Fei

Funder

Sichuan Science and Technology Support Project

China Agriculture Research System of MOF and MARA

National Natural Science Foundation of China

US Department of Agriculture–Agricultural Research Service

National Science Foundation

Publisher

Springer Science and Business Media LLC

Subject

Genetics,Agronomy and Crop Science,General Medicine,Biotechnology

Link

https://link.springer.com/content/pdf/10.1007/s00122-021-03965-1.pdf

Reference91 articles.

1. Albert FW, Kruglyak L (2015) The role of regulatory variation in complex traits and disease. Nat Rev Genet 16:197

2. Alonge M, Wang X, Benoit M, Soyk S, Pereira L, Zhang L, Suresh H, Ramakrishnan S, Maumus F, Ciren D, Levy Y, Harel TH, Shalev-Schlosser G, Amsellem Z, Razifard H, Caicedo AL, Tieman DM, Klee H, Kirsche M, Aganezov S, Ranallo-Benavidez TR, Lemmon ZH, Kim J, Robitaille G, Kramer M, Goodwin S, McCombie WR, Hutton S, Van Eck J, Gillis J, Eshed Y, Sedlazeck FJ, van der Knaap E, Schatz MC, Lippman ZB (2020) Major impacts of widespread structural variation on gene expression and crop improvement in tomato. Cell 182:145-161.e123

3. Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, Buckler ES (2007) TASSEL: software for association mapping of complex traits in diverse samples. Bioinformatics 23:2633–2635

4. Buckler ES, Holland JB, Bradbury PJ, Acharya CB, Brown PJ, Browne C, Ersoz E, Flint-Garcia S, Garcia A, Glaubitz JC, Goodman MM, Harjes C, Guill K, Kroon DE, Larsson S, Lepak NK, Li H, Mitchell SE, Pressoir G, Peiffer JA, Rosas MO, Rocheford TR, Romay MC, Romero S, Salvo S, Villeda HS, Sofia da Silva H, Sun Q, Tian F, Upadyayula N, Ware D, Yates H, Yu J, Zhang Z, Kresovich S, McMullen MD (2009) The genetic architecture of maize flowering time. Science 325:714

5. Bukowski R, Guo X, Lu Y, Zou C, He B, Rong Z, Wang B, Xu D, Yang B, Xie C, Fan L, Gao S, Xu X, Zhang G, Li Y, Jiao Y, Doebley JF, Ross-Ibarra J, Lorant A, Buffalo V, Romay MC, Buckler ES, Ware D, Lai J, Sun Q, Xu Y (2017) Construction of the third-generation Zea mays haplotype map. GigaScience 7

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1. Targeted large fragment deletion in plants using paired crRNAs with type I CRISPR system;Plant Biotechnology Journal;2023-08-29

2. Maize Leaf Diseases Classification using a Deep Learning Algorithm;2023 4th International Conference for Emerging Technology (INCET);2023-05-26

3. Identification of structural variations related to drought tolerance in wheat (Triticum aestivum L.);Theoretical and Applied Genetics;2023-03

4. Genome‐wide association study reveals structural chromosome variations with phenotypic effects in wheat ( Triticum aestivum L.);The Plant Journal;2022-11-18

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