The ams proteins and the amylovoran biosynthetic pathway: an extensive bioinformatic study

Abstract

AbstractThe genus Erwinia includes plant-pathogenic, non-pathogenic and even opportunistic human pathogens. Among them, Erwinia amylovora is one of the most studied species, as the etiological agent of the relevant necrotic plant disease fire blight. Its most important pathogenicity factor is amylovoran, an exopolysaccharide essential in the formation of a protective biofilm used by the bacterium to escape the plant protection mechanisms. Amylovoran biosynthesis, regulation and secretion require the concerted action of twelve genes clustered in a region spanning 16 kb, the ams operon. Most of the encoded proteins build and polymerize the repeating oligosaccharide units of galactose, glucose, glucuronic acid and pyruvate, others have signalling, regulation and secretion functions. We compared the ams operon organisation, predicted 3D structure of the encoded proteins of Erwinia amylovora in eighteen Erwinia species. We detected the presence of a paralog (for the amsG gene) and some rearrangements in the EPS biosynthetic operon in specific taxa that could be connected to the species-specific pathogenicity profile. The present study adds fundamental information about the genomic determinants of exopolysaccharide secretion in the Erwinia genus, and clarifies the evolutionary relationships among the genes in the ams operon.