Haplotype-Aware Sequence Alignment to Pangenome Graphs
Author:
Publisher
Springer Nature Switzerland
Link
https://link.springer.com/content/pdf/10.1007/978-1-0716-3989-4_36
Reference12 articles.
1. Abouelhoda, M., Ohlebusch, E.: Chaining algorithms for multiple genome comparison. J. Disc. Algor. 3(2–4), 321–341 (2005)
2. Chandra, G., Jain, C.: Gap-sensitive colinear chaining algorithms for acyclic pangenome graphs. J. Comput. Biol. 30(11), 1182–1197 (2023)
3. Chandra, G., Jain, C.: Haplotype-aware sequence-to-graph alignment. In: bioRxiv, pp. 2023–11 (2023). https://doi.org/10.1101/2023.11.15.566493
4. Ebler, J., et al.: Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes. Nat. Genet. 54(4), 518–525 (2022)
5. Li, H.: Sample graphs and sequences for testing sequence-to-graph alignment (2022). https://doi.org/10.5281/zenodo.6617246
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