DeepZ: A Deep Learning Approach for Z-DNA Prediction
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Publisher
Springer US
Link
https://link.springer.com/content/pdf/10.1007/978-1-0716-3084-6_15
Reference18 articles.
1. Li H, Xiao J, Li J, Lu L, Feng S, Droge P (2009) Human genomic Z-DNA segments probed by the Z alpha domain of ADAR1. Nucleic Acids Res 37(8):2737–2746. https://doi.org/10.1093/nar/gkp124
2. Herbert A (2020) ALU non-B-DNA conformations, flipons, binary codes and evolution. R Soc Open Sci 7(6):200222. https://doi.org/10.1098/rsos.200222
3. Herbert A, Alfken J, Kim YG, Mian IS, Nishikura K, Rich A (1997) A Z-DNA binding domain present in the human editing enzyme, double-stranded RNA adenosine deaminase. Proc Natl Acad Sci U S A 94(16):8421–8426. https://doi.org/10.1073/pnas.94.16.8421
4. Shin SI, Ham S, Park J, Seo SH, Lim CH, Jeon H, Huh J, Roh TY (2016) Z-DNA-forming sites identified by ChIP-Seq are associated with actively transcribed regions in the human genome. DNA Res 23:477. https://doi.org/10.1093/dnares/dsw031
5. Singh R, Lanchantin J, Robins G, Qi Y (2016) DeepChrome: deep-learning for predicting gene expression from histone modifications. Bioinformatics 32(17):i639–i648. https://doi.org/10.1093/bioinformatics/btw427
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